CDS

Accession Number TCMCG051C38065
gbkey CDS
Protein Id XP_024438859.1
Location complement(join(14137894..14137904,14138787..14140521,14140614..14140664))
Gene LOC18104614
GeneID 18104614
Organism Populus trichocarpa

Protein

Length 598aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024583091.1
Definition putative pentatricopeptide repeat-containing protein At5g09950 isoform X2 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category S
Description Pentatricopeptide repeat-containing protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016556        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCAACTTCTTGTTTTGAACTATTATCTAGCATGCAAATGGCAGATTCAGATACTTGCGAGAATTAAAAAATCTGGATTACTGGCAAATCTCTATGTGGGGAGTGCTTTGGCTGGTGGGTTGTCAAGGCTTGGATCGTTTGATTATGCTAGGAAAATTTTTGAGCAGATGACTGCAAGGAATGTTGTAGCTATGAATGGCTTAATGGTTGGTTTGGTCAGACAAAAATGTGGAGAGGAAGCTGTTGAAGTATTCAAGGAGACAAGACATTTGGTTGATATTAATGTTGATTCATATGTGATTCTGTTAAGTGCTTGTGCTGAATTTGCTCTCCTGGATGAAGGGAGAAGAAAGGGTAGAGAGGTTCATGGATATGCAATCCGAACTGGGTTAAATGATGCCAAGGTTGCTGTTGGAAATGGGCTTATTAATATGTATGCTAAATGTGGTGATATTGATCATGCAAGATCAGTATTTGGGCTCATGGTTGATAAGGATTCAGTCTCATGGAATTCCATGATTACTGGTCTTGACCAGAACAAGTGTTTTGAAGATGCAGTCAAGAGCTACAATTCAATGAGGAAAACTGGTTTGATGCCTTCCAATTTCACTTTGATAAGTGCTTTGAGTTCATGTGCAAGCTTGGGTTGCATTTTGCTGGGACAACAAACACATGGGGAAGGTATCAAATTAGGACTTGATATGGACGTTTCAGTTTCAAATACCCTTCTTGCATTGTATGCTGAAACTGGACATCTAGCTGAATGCCAGAAAGTTTTCTCCTGGATGCTGGAGCGTGATCAAGTATCATGGAACACTGTGATTGGGGCATTAGCTGATTCAGGGGCATCGGTTTCTGAAGCTATGGAAGTTTTCTTGGAAATGATGCGAGCTGGATGGAGTCCTAATAGAGTAACCTTCATAAACTTACTTGCTTCCGTTTCATCTCTCTCAACAAGTAAACTGAGCCACCAGATACATGCTCTAATACTGAAATACAATGTTAAGGATGCTAATGCCATTGAGAATGCTCTTTTGGCGTGCTATGGAAAGTCTGGAGAGATGGAAAACTGTGAGGAAATCTTTTCTAGAATGTCTGAGAGAAGAGATGAGGTTAGTTGGAATTCAATGATTTCTGGATATATACATAACGACCTCCTGTGCAAGGCCATGGATTTGGTCTGGTTAATGATGCAGAGGGGTCAGCGATTGGACTGTTTCACGTTTGCCACTGTTCTTAGTGCTTGTGCCACTGTGGCCACACTAGAGCGTGGAATGGAAGTACATGCCTGTGCAATAAGAGCTTGTTTAGAATCTGATGTTGTAATTGGGAGCGCACTTGTTGATATGTACTCAAAATGTGGAAGAATAGATTATGCATCGAGATTTTTTAATTTGATGCCTATGAGGAATTTGTATTCTTGGAACTCAATGATATCAGGCTATGCACGCCATGGCTATGGAGACAATGCTTTGAGGCTTTTCACACGAATGAAGCTCAGTGGTCAATTACCTGATCACATTACCTTTGTCGGGGTGTTGTCTGCTTGTAGCCACATTGGTTTAGTTGATGAAGGGTTTGAATATTTTAAATCCATGACTGAAGTGTATGGACTGGTTCCTCGTGTAGAACATTATTCATGTATGGTTGATCTTCTTGGACGGGCTGGTGAATTAGATAAGATAGATAATTTCATTAATAAGATGCCAATTAAGCCTAATATTCTTATTTGGAGAACAGTTTTAGGCGCTTGCTGCCGAGGAAATGGTCGAAAGACAGAATTAGGTTTATTGTAA
Protein:  
MQLLVLNYYLACKWQIQILARIKKSGLLANLYVGSALAGGLSRLGSFDYARKIFEQMTARNVVAMNGLMVGLVRQKCGEEAVEVFKETRHLVDINVDSYVILLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFTLISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAMEVFLEMMRAGWSPNRVTFINLLASVSSLSTSKLSHQIHALILKYNVKDANAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNDLLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLERGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPMRNLYSWNSMISGYARHGYGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIDNFINKMPIKPNILIWRTVLGACCRGNGRKTELGLL